People

Group Leader

Michal Kozubek

Full Professor

phone: +420 54949 4023

e-mail: kozubek@fi.muni.cz

office: FI A311

Research Interests
Benchmarks and challenges in biomedical image analysis

Academic Staff

Martin Maška

Research Fellow

phone: +420 54949 5774

e-mail: xmaska@fi.muni.cz

office: FI A312

Research Interests
Bioimage analysis; Image segmentation; Object tracking; Benchmarking

Pavel Matula

Associate Professor

phone: +420 54949 4752

e-mail: pam@fi.muni.cz

office: FI A308

Research Interests
Biomedical image analysis; Segmentation; Tracking

Petr Matula

Associate Professor

phone: +420 54949 4973

e-mail: pem@fi.muni.cz

office: FI A310

Research Interests
Biomedical image analysis; Mathematical morphology

David Svoboda

Associate Professor

phone: +420 54949 4383

e-mail: svoboda@fi.muni.cz

office: FI A307

Research Interests
Simulations and modeling; Virtual cell imaging; Digital image filtering

Vladimír Ulman

Currently primarily at IT4Innovations, Ostrava

phone: +420 54949 7684

e-mail: ulman@fi.muni.cz

office: FI A312

Research Interests
Simulations and modeling; Virtual cell imaging; Digital image filtering

Research Staff

Jan Michálek

Senior Researcher

phone: +420 54949 5097

e-mail: jan.michalek@fi.muni.cz

office: FI A314

Research Interests
Multimodal image analysis; Image registration; Image reconstruction

Roman Stoklasa

Currently on a postdoc at CERN, Geneva

phone: +420 54949 1873

e-mail: xstokla2@fi.muni.cz

office: FI A309

Research Interests
semantic segmentation; image understanding; machine learning

Karel Štěpka

Junior Researcher

phone: +420 549 49 5097

e-mail: 172454@mail.muni.cz

office: FI A314

Research Interests
Biomedical image analysis; Segmentation; Object detection

PhD Students

Cem Emre Akbaş

phone: +420 54949 7684

e-mail: akbas@fi.muni.cz

office: FI A312

Research Interests
Machine learning in cell segmentation and tracking

Sébastien Čagala Hu

phone: +420 739 271 599

e-mail: sebastien.cagala.hu@mail.muni.cz

office: FI A313

Research Interests
Biomedical image analysis; Image representations

Filip Lux

phone: +420 549 49 7684

e-mail: xlux@fi.muni.cz

office: FI A312

Research Interests
Image segmentation, Deep learning methods

Aleksandra Melnikova

phone: +420 549 49 4383

e-mail: 489785@mail.muni.cz

office: FI A307

Research Interests
Adaptive mathematical morphology, Image segmentation

Tereza Nečasová

phone: +420 549 49 1873

e-mail: necasovat@fi.muni.cz

office: FI A309

Research Interests
Statistical methods for image data comparison

David Wiesner

phone: +420-549496264

e-mail: davidw@mail.muni.cz

office: FI A313

Research Interests
Biomedical image synthesis; Cell populations; Optimization strategies