People

Group Leader

Michal Kozubek

Full Professor

phone: +420 54949 4023

e-mail: kozubek@fi.muni.cz

office: FI A311

Research Interests
Benchmarks and challenges in biomedical image analysis

Academic Staff

Irena Krontorád Koutná

Bio-Research Leader

phone: +420 54949 3969

e-mail: qkoutna@fi.muni.cz

office: ILBIT A3 2.14

Research Interests
Cell and tissue engineering; Mesenchymal stem cell research

Martin Maška

Research Fellow

phone: +420 54949 5774

e-mail: xmaska@fi.muni.cz

office: FI A312

Research Interests
Bioimage analysis; Image segmentation; Object tracking; Benchmarking

Pavel Matula

Associate Professor

phone: +420 54949 4752

e-mail: pam@fi.muni.cz

office: FI A308

Research Interests
Biomedical image analysis; Segmentation; Tracking

Petr Matula

Associate Professor

phone: +420 54949 4973

e-mail: pem@fi.muni.cz

office: FI A310

Research Interests
Biomedical image analysis; Mathematical morphology

David Svoboda

Associate Professor

phone: +420 54949 4383

e-mail: svoboda@fi.muni.cz

office: FI A307

Research Interests
Simulations and modeling; Virtual cell imaging; Digital image filtering

Vladimír Ulman

Currently on long-term stay at MPI Dresden

phone: +420 54949 4383

e-mail: xulman@fi.muni.cz

office: FI A307

Research Interests
Simulations and modeling; Virtual cell imaging; Digital image filtering

Research Staff

Jan Michálek

Senior Researcher

phone: +420 54949 5097

e-mail: jan.michalek@fi.muni.cz

office: FI A314

Research Interests
Multimodal image analysis; Image registration; Image reconstruction

Roman Stoklasa

Junior Researcher

phone: +420 54949 1873

e-mail: xstokla2@fi.muni.cz

office: FI A309

Research Interests
semantic segmentation; image understanding; machine learning

Pavel Šimara

Senior Researcher

phone: +420 54949 3976

e-mail: p.simara@mail.muni.cz

office: ILBIT A3 2.13

Research Interests
Induced pluripotent stem cell research; Genome integrity

Karel Štěpka

Junior Researcher

phone: +420 549 49 5097

e-mail: 172454@mail.muni.cz

office: FI A314

Research Interests
Biomedical image analysis; Segmentation; Object detection

Lenka Tesařová

Senior Researcher

phone: +420 54949 3976

e-mail: tessis@mail.muni.cz

office: ILBIT A3 2.13

Research Interests
Cell and tissue engineering; Mesenchymal stem cell research

PhD Students

Cem Emre Akbaş

phone: +420 54949 7684

e-mail: akbas@fi.muni.cz

office: FI A312

Research Interests
Machine learning in cell segmentation and tracking

Šimon Farkaš

phone: +420 54949 1851

e-mail: simon.farkas@mail.muni.cz

office: ILBIT A3 1.15

Research Interests
Induced pluripotent stem cell research; Endothelial differentiation

Kateřina Kutálková

phone: +420 54949 1851

e-mail: 408828@mail.muni.cz

office: ILBIT A3 1.15

Research Interests
Endothelial differentiation; Mesenchymal stem cell research

Filip Lux

phone: +420 549 49 7684

e-mail: xlux@fi.muni.cz

office: FI A312

Research Interests
Image segmentation, Deep learning methods

Aleksandra Melnikova

phone: +420 549 49 4383

e-mail: 489785@mail.muni.cz

office: FI A307

Research Interests
Adaptive mathematical morphology, Image segmentation

Tereza Nečasová

phone: +420 549 49 1873

e-mail: necasovat@fi.muni.cz

office: FI A309

Research Interests
Statistical methods for image data comparison

Daniela Řeháková

phone: +420 54949 1851

e-mail: danka.rehakova@mail.muni.cz

office: ILBIT A3 1.15

Research Interests
Induced pluripotent stem cell research; Genome integrity

Martin Spurný

phone: +420 54949 7684

e-mail: xspurny@fi.muni.cz

office: FI A312

Research Interests
Digital image and video forensics; Image and video acquisitions; Machine learning in image and video content forensics

David Wiesner

phone: +420-549496264

e-mail: davidw@mail.muni.cz

office: FI A313

Research Interests
Biomedical image synthesis; Cell populations; Optimization strategies

Technical Staff

Klára Schichelová

Laboratory Assistant

phone: +420 54949 1851

e-mail: 408873@mail.muni.cz

office: ILBIT A3 1.15

Coverage
Mesenchymal stem cell research